Machine-learning approach using sar data for the classification of oil palm trees that are non-infected and infected with the basal stem rot disease

Basal stem rot disease (BSR) in oil palm plants is caused by the Ganoderma boninense (G. boninense) fungus. BSR is a major disease that affects oil palm plantations in Malaysia and Indonesia. As of now, the only available sustaining measure is to prolong the life of oil palm trees since there has be...

Full description

Bibliographic Details
Published in:Agronomy
Main Author: 2-s2.0-85108782223
Format: Article
Language:English
Published: MDPI AG 2021
Online Access:https://www.scopus.com/inward/record.uri?eid=2-s2.0-85108782223&doi=10.3390%2fagronomy11030532&partnerID=40&md5=235f9e096dfb4da8d6be23d095ba54d3
id Hashim I.C.; Shariff A.R.M.; Bejo S.K.; Muharam F.M.; Ahmad K.
spelling Hashim I.C.; Shariff A.R.M.; Bejo S.K.; Muharam F.M.; Ahmad K.
2-s2.0-85108782223
Machine-learning approach using sar data for the classification of oil palm trees that are non-infected and infected with the basal stem rot disease
2021
Agronomy
11
3
10.3390/agronomy11030532
https://www.scopus.com/inward/record.uri?eid=2-s2.0-85108782223&doi=10.3390%2fagronomy11030532&partnerID=40&md5=235f9e096dfb4da8d6be23d095ba54d3
Basal stem rot disease (BSR) in oil palm plants is caused by the Ganoderma boninense (G. boninense) fungus. BSR is a major disease that affects oil palm plantations in Malaysia and Indonesia. As of now, the only available sustaining measure is to prolong the life of oil palm trees since there has been no effective treatment for the BSR disease. This project used an ALOS PALSAR-2 image with dual polarization, Horizontal transmit and Horizontal receive (HH) and Horizontal transmit and Vertical receive (HV). The aims of this study were to (1) identify the potential backscatter variables; and (2) examine the performance of machine learning (ML) classifiers (Multilayer Perceptron (MLP) and Random Forest (RF) to classify oil palm trees that are non-infected and infected by G. boninense. The sample size consisted of 55 uninfected trees and 37 infected trees. We used the imbalance data approach (Synthetic Minority Over-Sampling Technique (SMOTE) in these classifications due to the differing sample sizes. The result showed backscatter variable HV had a higher correct classification for the G. boninense non-infected and infected oil palm trees for both classifiers; the MLP classifier model had a robust success rate, which correctly classified 100% for non-infected and 91.30% for infected G. boninense, and RF had a robust success rate, which correctly classified 94.11% for non-infected and 91.30% for infected G. boninense. In terms of model performance using the most significant variables, HV, the MLP model had a balanced accuracy (BCR) of 95.65% compared to 92.70% for the RF model. Comparison between the MLP model and RF model for the receiver operating characteristics (ROC) curve region, (AUC) gave a value of 0.92 and 0.95, respectively, for the MLP and RF models. Therefore, it can be concluded by using only the HV polarization, that both the MLP and RF can be used to predict BSR disease with a relatively high accuracy. © 2021 by the authors. Licensee MDPI, Basel, Switzerland.
MDPI AG
20734395
English
Article
All Open Access; Gold Open Access
author 2-s2.0-85108782223
spellingShingle 2-s2.0-85108782223
Machine-learning approach using sar data for the classification of oil palm trees that are non-infected and infected with the basal stem rot disease
author_facet 2-s2.0-85108782223
author_sort 2-s2.0-85108782223
title Machine-learning approach using sar data for the classification of oil palm trees that are non-infected and infected with the basal stem rot disease
title_short Machine-learning approach using sar data for the classification of oil palm trees that are non-infected and infected with the basal stem rot disease
title_full Machine-learning approach using sar data for the classification of oil palm trees that are non-infected and infected with the basal stem rot disease
title_fullStr Machine-learning approach using sar data for the classification of oil palm trees that are non-infected and infected with the basal stem rot disease
title_full_unstemmed Machine-learning approach using sar data for the classification of oil palm trees that are non-infected and infected with the basal stem rot disease
title_sort Machine-learning approach using sar data for the classification of oil palm trees that are non-infected and infected with the basal stem rot disease
publishDate 2021
container_title Agronomy
container_volume 11
container_issue 3
doi_str_mv 10.3390/agronomy11030532
url https://www.scopus.com/inward/record.uri?eid=2-s2.0-85108782223&doi=10.3390%2fagronomy11030532&partnerID=40&md5=235f9e096dfb4da8d6be23d095ba54d3
description Basal stem rot disease (BSR) in oil palm plants is caused by the Ganoderma boninense (G. boninense) fungus. BSR is a major disease that affects oil palm plantations in Malaysia and Indonesia. As of now, the only available sustaining measure is to prolong the life of oil palm trees since there has been no effective treatment for the BSR disease. This project used an ALOS PALSAR-2 image with dual polarization, Horizontal transmit and Horizontal receive (HH) and Horizontal transmit and Vertical receive (HV). The aims of this study were to (1) identify the potential backscatter variables; and (2) examine the performance of machine learning (ML) classifiers (Multilayer Perceptron (MLP) and Random Forest (RF) to classify oil palm trees that are non-infected and infected by G. boninense. The sample size consisted of 55 uninfected trees and 37 infected trees. We used the imbalance data approach (Synthetic Minority Over-Sampling Technique (SMOTE) in these classifications due to the differing sample sizes. The result showed backscatter variable HV had a higher correct classification for the G. boninense non-infected and infected oil palm trees for both classifiers; the MLP classifier model had a robust success rate, which correctly classified 100% for non-infected and 91.30% for infected G. boninense, and RF had a robust success rate, which correctly classified 94.11% for non-infected and 91.30% for infected G. boninense. In terms of model performance using the most significant variables, HV, the MLP model had a balanced accuracy (BCR) of 95.65% compared to 92.70% for the RF model. Comparison between the MLP model and RF model for the receiver operating characteristics (ROC) curve region, (AUC) gave a value of 0.92 and 0.95, respectively, for the MLP and RF models. Therefore, it can be concluded by using only the HV polarization, that both the MLP and RF can be used to predict BSR disease with a relatively high accuracy. © 2021 by the authors. Licensee MDPI, Basel, Switzerland.
publisher MDPI AG
issn 20734395
language English
format Article
accesstype All Open Access; Gold Open Access
record_format scopus
collection Scopus
_version_ 1828987870670487552