Microsatellite (mEgCIR3808) Analysis in Oil Palm: An Optimisation of a Direct PCR-based using FTA Card as a Storage Medium

This paper explores the effectiveness of Flinders Technology Associates (FTA) card, with a focus on the role of FTA card application in storing oil palm DNA for PCR analysis. The study underscores the importance of optimising the washing steps of FTA card and validation of PCR amplification of using...

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Published in:International Journal of Integrated Engineering
Main Author: Asri N.A.S.M.; Zulkifli A.A.; Bin Midin M.R.; Hanafi W.N.W.
Format: Article
Language:English
Published: Penerbit UTHM 2024
Online Access:https://www.scopus.com/inward/record.uri?eid=2-s2.0-85212147429&doi=10.30880%2fijie.2024.16.08.009&partnerID=40&md5=fb6d093c21f6da19ecae0658f5e33b01
id 2-s2.0-85212147429
spelling 2-s2.0-85212147429
Asri N.A.S.M.; Zulkifli A.A.; Bin Midin M.R.; Hanafi W.N.W.
Microsatellite (mEgCIR3808) Analysis in Oil Palm: An Optimisation of a Direct PCR-based using FTA Card as a Storage Medium
2024
International Journal of Integrated Engineering
16
8
10.30880/ijie.2024.16.08.009
https://www.scopus.com/inward/record.uri?eid=2-s2.0-85212147429&doi=10.30880%2fijie.2024.16.08.009&partnerID=40&md5=fb6d093c21f6da19ecae0658f5e33b01
This paper explores the effectiveness of Flinders Technology Associates (FTA) card, with a focus on the role of FTA card application in storing oil palm DNA for PCR analysis. The study underscores the importance of optimising the washing steps of FTA card and validation of PCR amplification of using optimised washing steps towards oil palm leaves. Therefore, the study specifically examines practices for FTA washing method for oil palm sample which is crucial and necessary in obtaining promising results. The optimised washing steps such adding centrifugation while washing the FTA cards matters and has proven to enhance the band intensity of the PCR amplification results. An optimised, proper and accurate first-basis fundamental steps will contribute the value of SSR fingerprinting as a molecular detection for Elaeis guineensis, highlighting the potential of genetic markers in oil palm research. © This is an open access article under the CC BY-NC-SA 4.0 license.
Penerbit UTHM
2229838X
English
Article

author Asri N.A.S.M.; Zulkifli A.A.; Bin Midin M.R.; Hanafi W.N.W.
spellingShingle Asri N.A.S.M.; Zulkifli A.A.; Bin Midin M.R.; Hanafi W.N.W.
Microsatellite (mEgCIR3808) Analysis in Oil Palm: An Optimisation of a Direct PCR-based using FTA Card as a Storage Medium
author_facet Asri N.A.S.M.; Zulkifli A.A.; Bin Midin M.R.; Hanafi W.N.W.
author_sort Asri N.A.S.M.; Zulkifli A.A.; Bin Midin M.R.; Hanafi W.N.W.
title Microsatellite (mEgCIR3808) Analysis in Oil Palm: An Optimisation of a Direct PCR-based using FTA Card as a Storage Medium
title_short Microsatellite (mEgCIR3808) Analysis in Oil Palm: An Optimisation of a Direct PCR-based using FTA Card as a Storage Medium
title_full Microsatellite (mEgCIR3808) Analysis in Oil Palm: An Optimisation of a Direct PCR-based using FTA Card as a Storage Medium
title_fullStr Microsatellite (mEgCIR3808) Analysis in Oil Palm: An Optimisation of a Direct PCR-based using FTA Card as a Storage Medium
title_full_unstemmed Microsatellite (mEgCIR3808) Analysis in Oil Palm: An Optimisation of a Direct PCR-based using FTA Card as a Storage Medium
title_sort Microsatellite (mEgCIR3808) Analysis in Oil Palm: An Optimisation of a Direct PCR-based using FTA Card as a Storage Medium
publishDate 2024
container_title International Journal of Integrated Engineering
container_volume 16
container_issue 8
doi_str_mv 10.30880/ijie.2024.16.08.009
url https://www.scopus.com/inward/record.uri?eid=2-s2.0-85212147429&doi=10.30880%2fijie.2024.16.08.009&partnerID=40&md5=fb6d093c21f6da19ecae0658f5e33b01
description This paper explores the effectiveness of Flinders Technology Associates (FTA) card, with a focus on the role of FTA card application in storing oil palm DNA for PCR analysis. The study underscores the importance of optimising the washing steps of FTA card and validation of PCR amplification of using optimised washing steps towards oil palm leaves. Therefore, the study specifically examines practices for FTA washing method for oil palm sample which is crucial and necessary in obtaining promising results. The optimised washing steps such adding centrifugation while washing the FTA cards matters and has proven to enhance the band intensity of the PCR amplification results. An optimised, proper and accurate first-basis fundamental steps will contribute the value of SSR fingerprinting as a molecular detection for Elaeis guineensis, highlighting the potential of genetic markers in oil palm research. © This is an open access article under the CC BY-NC-SA 4.0 license.
publisher Penerbit UTHM
issn 2229838X
language English
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