Microarray Profiling of Differentially Expressed Genes in Coronary Artery Bypass Grafts of High-Risk Patients with Postoperative Cognitive Dysfunctions

Postoperative cognitive dysfunction (POCD) is cognitive decline after surgery. The authors hypothesized that gene-level changes could be involved in the pathogenesis of POCD. The present study evaluated the incidence of POCD and its associated differentially expressed genes. This was a prospective c...

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Published in:International Journal of Environmental Research and Public Health
Main Author: Yazit N.A.A.; Juliana N.; Kadiman S.; Hafidz K.M.; Mohd Fahmi Teng N.I.; Abdul Hamid N.; Effendy N.; Azmani S.; Abu I.F.; Aziz N.A.S.A.; Das S.
Format: Article
Language:English
Published: MDPI 2023
Online Access:https://www.scopus.com/inward/record.uri?eid=2-s2.0-85146540800&doi=10.3390%2fijerph20021457&partnerID=40&md5=d902b69fbedbb980cfb0b131fd61fee6
id 2-s2.0-85146540800
spelling 2-s2.0-85146540800
Yazit N.A.A.; Juliana N.; Kadiman S.; Hafidz K.M.; Mohd Fahmi Teng N.I.; Abdul Hamid N.; Effendy N.; Azmani S.; Abu I.F.; Aziz N.A.S.A.; Das S.
Microarray Profiling of Differentially Expressed Genes in Coronary Artery Bypass Grafts of High-Risk Patients with Postoperative Cognitive Dysfunctions
2023
International Journal of Environmental Research and Public Health
20
2
10.3390/ijerph20021457
https://www.scopus.com/inward/record.uri?eid=2-s2.0-85146540800&doi=10.3390%2fijerph20021457&partnerID=40&md5=d902b69fbedbb980cfb0b131fd61fee6
Postoperative cognitive dysfunction (POCD) is cognitive decline after surgery. The authors hypothesized that gene-level changes could be involved in the pathogenesis of POCD. The present study evaluated the incidence of POCD and its associated differentially expressed genes. This was a prospective cohort study conducted on high-risk coronary artery bypass graft patients aged 40 to 75 years. POCD classification was based on a one standard deviation decline in the postoperative scores compared to the preoperative scores. The differentially expressed genes were identified using microarray analysis and validated using quantitative RT-PCR. Forty-six patients were recruited and completed the study. The incidence of POCD was identified using a set of neurocognitive assessments and found to be at 17% in these high-risk CABG patients. Six samples were selected for the gene expression analyses (3 non-POCD and 3 POCD samples). The findings showed five differentially expressed genes in the POCD group compared to the non-POCD group. The upregulated gene was ERFE, whereas the downregulated genes were KIR2DS2, KIR2DS3, KIR3DL2, and LIM2. According to the results, the gene expression profiles of POCD can be used to find potential proteins for POCD diagnostic and predictive biomarkers. Understanding the molecular mechanism of POCD development will further lead to early detection and intervention to reduce the severity of POCD, and hence, reduce the mortality and morbidity rate due to the condition. © 2023 by the authors.
MDPI
16617827
English
Article
All Open Access; Gold Open Access
author Yazit N.A.A.; Juliana N.; Kadiman S.; Hafidz K.M.; Mohd Fahmi Teng N.I.; Abdul Hamid N.; Effendy N.; Azmani S.; Abu I.F.; Aziz N.A.S.A.; Das S.
spellingShingle Yazit N.A.A.; Juliana N.; Kadiman S.; Hafidz K.M.; Mohd Fahmi Teng N.I.; Abdul Hamid N.; Effendy N.; Azmani S.; Abu I.F.; Aziz N.A.S.A.; Das S.
Microarray Profiling of Differentially Expressed Genes in Coronary Artery Bypass Grafts of High-Risk Patients with Postoperative Cognitive Dysfunctions
author_facet Yazit N.A.A.; Juliana N.; Kadiman S.; Hafidz K.M.; Mohd Fahmi Teng N.I.; Abdul Hamid N.; Effendy N.; Azmani S.; Abu I.F.; Aziz N.A.S.A.; Das S.
author_sort Yazit N.A.A.; Juliana N.; Kadiman S.; Hafidz K.M.; Mohd Fahmi Teng N.I.; Abdul Hamid N.; Effendy N.; Azmani S.; Abu I.F.; Aziz N.A.S.A.; Das S.
title Microarray Profiling of Differentially Expressed Genes in Coronary Artery Bypass Grafts of High-Risk Patients with Postoperative Cognitive Dysfunctions
title_short Microarray Profiling of Differentially Expressed Genes in Coronary Artery Bypass Grafts of High-Risk Patients with Postoperative Cognitive Dysfunctions
title_full Microarray Profiling of Differentially Expressed Genes in Coronary Artery Bypass Grafts of High-Risk Patients with Postoperative Cognitive Dysfunctions
title_fullStr Microarray Profiling of Differentially Expressed Genes in Coronary Artery Bypass Grafts of High-Risk Patients with Postoperative Cognitive Dysfunctions
title_full_unstemmed Microarray Profiling of Differentially Expressed Genes in Coronary Artery Bypass Grafts of High-Risk Patients with Postoperative Cognitive Dysfunctions
title_sort Microarray Profiling of Differentially Expressed Genes in Coronary Artery Bypass Grafts of High-Risk Patients with Postoperative Cognitive Dysfunctions
publishDate 2023
container_title International Journal of Environmental Research and Public Health
container_volume 20
container_issue 2
doi_str_mv 10.3390/ijerph20021457
url https://www.scopus.com/inward/record.uri?eid=2-s2.0-85146540800&doi=10.3390%2fijerph20021457&partnerID=40&md5=d902b69fbedbb980cfb0b131fd61fee6
description Postoperative cognitive dysfunction (POCD) is cognitive decline after surgery. The authors hypothesized that gene-level changes could be involved in the pathogenesis of POCD. The present study evaluated the incidence of POCD and its associated differentially expressed genes. This was a prospective cohort study conducted on high-risk coronary artery bypass graft patients aged 40 to 75 years. POCD classification was based on a one standard deviation decline in the postoperative scores compared to the preoperative scores. The differentially expressed genes were identified using microarray analysis and validated using quantitative RT-PCR. Forty-six patients were recruited and completed the study. The incidence of POCD was identified using a set of neurocognitive assessments and found to be at 17% in these high-risk CABG patients. Six samples were selected for the gene expression analyses (3 non-POCD and 3 POCD samples). The findings showed five differentially expressed genes in the POCD group compared to the non-POCD group. The upregulated gene was ERFE, whereas the downregulated genes were KIR2DS2, KIR2DS3, KIR3DL2, and LIM2. According to the results, the gene expression profiles of POCD can be used to find potential proteins for POCD diagnostic and predictive biomarkers. Understanding the molecular mechanism of POCD development will further lead to early detection and intervention to reduce the severity of POCD, and hence, reduce the mortality and morbidity rate due to the condition. © 2023 by the authors.
publisher MDPI
issn 16617827
language English
format Article
accesstype All Open Access; Gold Open Access
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collection Scopus
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