Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus

In this study, a set of 72 styryl lactone compounds reported from Goniothalamus species were docked against envelope (E), NS2B/NS3, NS5 methyltransferase (MTase), and NS5 RdRp dengue virus (DENV) protein. As a result, compounds 5, 37, 38, and 47 were identified as potential dengue protease inhibitor...

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Published in:Journal of Computational Biophysics and Chemistry
Main Author: Abdullah N.N.; Imran S.; Lam K.W.; Ismail N.H.
Format: Article
Language:English
Published: World Scientific 2022
Online Access:https://www.scopus.com/inward/record.uri?eid=2-s2.0-85135765821&doi=10.1142%2fS2737416522500363&partnerID=40&md5=23d1297bff51178fe51786bdc563fcf5
id 2-s2.0-85135765821
spelling 2-s2.0-85135765821
Abdullah N.N.; Imran S.; Lam K.W.; Ismail N.H.
Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus
2022
Journal of Computational Biophysics and Chemistry
21
7
10.1142/S2737416522500363
https://www.scopus.com/inward/record.uri?eid=2-s2.0-85135765821&doi=10.1142%2fS2737416522500363&partnerID=40&md5=23d1297bff51178fe51786bdc563fcf5
In this study, a set of 72 styryl lactone compounds reported from Goniothalamus species were docked against envelope (E), NS2B/NS3, NS5 methyltransferase (MTase), and NS5 RdRp dengue virus (DENV) protein. As a result, compounds 5, 37, 38, and 47 were identified as potential dengue protease inhibitors based on minimal docking energy values and multiple interactions with binding sites. The results from in-silico Lipinski's rule and ADMET analysis showed that these compounds were predicted to fulfil the drug-likeness properties. These ligands were found to fit in well and remain stable in the binding site of the envelope protein, NS2B/NS3, NS5 MTase, and NS5 RdRp. The results from molecular dynamic (MD) simulations indicate that the ligand-protein complex of compound 37 with NS5 MTase was stable throughout the MDs simulations and could interact with essential amino acids within the active sites. © 2022 World Scientific Publishing Company.
World Scientific
27374165
English
Article

author Abdullah N.N.; Imran S.; Lam K.W.; Ismail N.H.
spellingShingle Abdullah N.N.; Imran S.; Lam K.W.; Ismail N.H.
Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus
author_facet Abdullah N.N.; Imran S.; Lam K.W.; Ismail N.H.
author_sort Abdullah N.N.; Imran S.; Lam K.W.; Ismail N.H.
title Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus
title_short Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus
title_full Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus
title_fullStr Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus
title_full_unstemmed Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus
title_sort Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus
publishDate 2022
container_title Journal of Computational Biophysics and Chemistry
container_volume 21
container_issue 7
doi_str_mv 10.1142/S2737416522500363
url https://www.scopus.com/inward/record.uri?eid=2-s2.0-85135765821&doi=10.1142%2fS2737416522500363&partnerID=40&md5=23d1297bff51178fe51786bdc563fcf5
description In this study, a set of 72 styryl lactone compounds reported from Goniothalamus species were docked against envelope (E), NS2B/NS3, NS5 methyltransferase (MTase), and NS5 RdRp dengue virus (DENV) protein. As a result, compounds 5, 37, 38, and 47 were identified as potential dengue protease inhibitors based on minimal docking energy values and multiple interactions with binding sites. The results from in-silico Lipinski's rule and ADMET analysis showed that these compounds were predicted to fulfil the drug-likeness properties. These ligands were found to fit in well and remain stable in the binding site of the envelope protein, NS2B/NS3, NS5 MTase, and NS5 RdRp. The results from molecular dynamic (MD) simulations indicate that the ligand-protein complex of compound 37 with NS5 MTase was stable throughout the MDs simulations and could interact with essential amino acids within the active sites. © 2022 World Scientific Publishing Company.
publisher World Scientific
issn 27374165
language English
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