Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus
In this study, a set of 72 styryl lactone compounds reported from Goniothalamus species were docked against envelope (E), NS2B/NS3, NS5 methyltransferase (MTase), and NS5 RdRp dengue virus (DENV) protein. As a result, compounds 5, 37, 38, and 47 were identified as potential dengue protease inhibitor...
Published in: | Journal of Computational Biophysics and Chemistry |
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2-s2.0-85135765821 Abdullah N.N.; Imran S.; Lam K.W.; Ismail N.H. Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus 2022 Journal of Computational Biophysics and Chemistry 21 7 10.1142/S2737416522500363 https://www.scopus.com/inward/record.uri?eid=2-s2.0-85135765821&doi=10.1142%2fS2737416522500363&partnerID=40&md5=23d1297bff51178fe51786bdc563fcf5 In this study, a set of 72 styryl lactone compounds reported from Goniothalamus species were docked against envelope (E), NS2B/NS3, NS5 methyltransferase (MTase), and NS5 RdRp dengue virus (DENV) protein. As a result, compounds 5, 37, 38, and 47 were identified as potential dengue protease inhibitors based on minimal docking energy values and multiple interactions with binding sites. The results from in-silico Lipinski's rule and ADMET analysis showed that these compounds were predicted to fulfil the drug-likeness properties. These ligands were found to fit in well and remain stable in the binding site of the envelope protein, NS2B/NS3, NS5 MTase, and NS5 RdRp. The results from molecular dynamic (MD) simulations indicate that the ligand-protein complex of compound 37 with NS5 MTase was stable throughout the MDs simulations and could interact with essential amino acids within the active sites. © 2022 World Scientific Publishing Company. World Scientific 27374165 English Article |
author |
Abdullah N.N.; Imran S.; Lam K.W.; Ismail N.H. |
spellingShingle |
Abdullah N.N.; Imran S.; Lam K.W.; Ismail N.H. Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus |
author_facet |
Abdullah N.N.; Imran S.; Lam K.W.; Ismail N.H. |
author_sort |
Abdullah N.N.; Imran S.; Lam K.W.; Ismail N.H. |
title |
Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus |
title_short |
Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus |
title_full |
Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus |
title_fullStr |
Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus |
title_full_unstemmed |
Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus |
title_sort |
Computational Screening of Styryl Lactone Compounds Isolated from Goniothalamus Species to Identify Potential Inhibitors for Dengue Virus |
publishDate |
2022 |
container_title |
Journal of Computational Biophysics and Chemistry |
container_volume |
21 |
container_issue |
7 |
doi_str_mv |
10.1142/S2737416522500363 |
url |
https://www.scopus.com/inward/record.uri?eid=2-s2.0-85135765821&doi=10.1142%2fS2737416522500363&partnerID=40&md5=23d1297bff51178fe51786bdc563fcf5 |
description |
In this study, a set of 72 styryl lactone compounds reported from Goniothalamus species were docked against envelope (E), NS2B/NS3, NS5 methyltransferase (MTase), and NS5 RdRp dengue virus (DENV) protein. As a result, compounds 5, 37, 38, and 47 were identified as potential dengue protease inhibitors based on minimal docking energy values and multiple interactions with binding sites. The results from in-silico Lipinski's rule and ADMET analysis showed that these compounds were predicted to fulfil the drug-likeness properties. These ligands were found to fit in well and remain stable in the binding site of the envelope protein, NS2B/NS3, NS5 MTase, and NS5 RdRp. The results from molecular dynamic (MD) simulations indicate that the ligand-protein complex of compound 37 with NS5 MTase was stable throughout the MDs simulations and could interact with essential amino acids within the active sites. © 2022 World Scientific Publishing Company. |
publisher |
World Scientific |
issn |
27374165 |
language |
English |
format |
Article |
accesstype |
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record_format |
scopus |
collection |
Scopus |
_version_ |
1809677891125903360 |