Amplification-free and direct fluorometric determination of telomerase activity in cell lysates using chimeric DNA-templated silver nanoclusters

A fluorogenic probe has been developed for determination of telomerase activity using chimeric DNA-templated silver nanoclusters (AgNCs). The formation of AgNCs was investigated before (route A) and after (route B) telomerase elongation reaction. Both routes caused selective quenching of the yellow...

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Published in:Microchimica Acta
Main Author: Lee S.T.; Rahman R.; Muthoosamy K.; Mohamed N.A.H.; Su X.D.; Tayyab S.; New S.Y.
Format: Article
Language:English
Published: Springer-Verlag Wien 2019
Online Access:https://www.scopus.com/inward/record.uri?eid=2-s2.0-85059798233&doi=10.1007%2fs00604-018-3194-7&partnerID=40&md5=94f15148527e05ffa11bb3515193cd86
id 2-s2.0-85059798233
spelling 2-s2.0-85059798233
Lee S.T.; Rahman R.; Muthoosamy K.; Mohamed N.A.H.; Su X.D.; Tayyab S.; New S.Y.
Amplification-free and direct fluorometric determination of telomerase activity in cell lysates using chimeric DNA-templated silver nanoclusters
2019
Microchimica Acta
186
2
10.1007/s00604-018-3194-7
https://www.scopus.com/inward/record.uri?eid=2-s2.0-85059798233&doi=10.1007%2fs00604-018-3194-7&partnerID=40&md5=94f15148527e05ffa11bb3515193cd86
A fluorogenic probe has been developed for determination of telomerase activity using chimeric DNA-templated silver nanoclusters (AgNCs). The formation of AgNCs was investigated before (route A) and after (route B) telomerase elongation reaction. Both routes caused selective quenching of the yellow emission of the AgNCs (best measured at excitation/emission wavelength of 470/557 nm) in telomerase-positive samples. The quenching mechanism was studied using synthetically elongated DNA to mimic the telomerase-catalyzed elongation. The findings show that quenching is due to the formation of parallel G-quadruplexes with a –TTA– loop in the telomerase elongated products. The assay was validated using different cancer cell extracts, with intra- and interassay coefficients of variations of <9.8%. The limits of detection for MCF7, RPMI 2650 and HT29 cell lines are 15, 22 and 39 cells/μL. This represents a distinct improvement over the existing telomeric repeat amplification protocol (TRAP) assay in terms of time, sensitivity and cost. [Figure not available: see fulltext.]. © 2019, Springer-Verlag GmbH Austria, part of Springer Nature.
Springer-Verlag Wien
00263672
English
Article

author Lee S.T.; Rahman R.; Muthoosamy K.; Mohamed N.A.H.; Su X.D.; Tayyab S.; New S.Y.
spellingShingle Lee S.T.; Rahman R.; Muthoosamy K.; Mohamed N.A.H.; Su X.D.; Tayyab S.; New S.Y.
Amplification-free and direct fluorometric determination of telomerase activity in cell lysates using chimeric DNA-templated silver nanoclusters
author_facet Lee S.T.; Rahman R.; Muthoosamy K.; Mohamed N.A.H.; Su X.D.; Tayyab S.; New S.Y.
author_sort Lee S.T.; Rahman R.; Muthoosamy K.; Mohamed N.A.H.; Su X.D.; Tayyab S.; New S.Y.
title Amplification-free and direct fluorometric determination of telomerase activity in cell lysates using chimeric DNA-templated silver nanoclusters
title_short Amplification-free and direct fluorometric determination of telomerase activity in cell lysates using chimeric DNA-templated silver nanoclusters
title_full Amplification-free and direct fluorometric determination of telomerase activity in cell lysates using chimeric DNA-templated silver nanoclusters
title_fullStr Amplification-free and direct fluorometric determination of telomerase activity in cell lysates using chimeric DNA-templated silver nanoclusters
title_full_unstemmed Amplification-free and direct fluorometric determination of telomerase activity in cell lysates using chimeric DNA-templated silver nanoclusters
title_sort Amplification-free and direct fluorometric determination of telomerase activity in cell lysates using chimeric DNA-templated silver nanoclusters
publishDate 2019
container_title Microchimica Acta
container_volume 186
container_issue 2
doi_str_mv 10.1007/s00604-018-3194-7
url https://www.scopus.com/inward/record.uri?eid=2-s2.0-85059798233&doi=10.1007%2fs00604-018-3194-7&partnerID=40&md5=94f15148527e05ffa11bb3515193cd86
description A fluorogenic probe has been developed for determination of telomerase activity using chimeric DNA-templated silver nanoclusters (AgNCs). The formation of AgNCs was investigated before (route A) and after (route B) telomerase elongation reaction. Both routes caused selective quenching of the yellow emission of the AgNCs (best measured at excitation/emission wavelength of 470/557 nm) in telomerase-positive samples. The quenching mechanism was studied using synthetically elongated DNA to mimic the telomerase-catalyzed elongation. The findings show that quenching is due to the formation of parallel G-quadruplexes with a –TTA– loop in the telomerase elongated products. The assay was validated using different cancer cell extracts, with intra- and interassay coefficients of variations of <9.8%. The limits of detection for MCF7, RPMI 2650 and HT29 cell lines are 15, 22 and 39 cells/μL. This represents a distinct improvement over the existing telomeric repeat amplification protocol (TRAP) assay in terms of time, sensitivity and cost. [Figure not available: see fulltext.]. © 2019, Springer-Verlag GmbH Austria, part of Springer Nature.
publisher Springer-Verlag Wien
issn 00263672
language English
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