A novel rare copy number variant of the ABCF1 gene identified among dengue fever patients from Peninsular Malaysia

Copy number variation (CNV) is a form of genetic variation in addition to single nucleotide polymorphisms. The significance of CNV in the manifestation of a number of diseases is only recently receiving considerable attention. We genotyped 163 dengue patients from Peninsular Malaysia for genes possi...

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出版年:Genetics and Molecular Research
第一著者: Hoh B.P.; Sam S.S.; Umi S.H.; Mahiran M.; Nik Khairudin N.Y.; Rafidah Hanim S.; AbuBakar S.
フォーマット: 論文
言語:English
出版事項: Fundacao de Pesquisas Cientificas de Ribeirao Preto 2014
オンライン・アクセス:https://www.scopus.com/inward/record.uri?eid=2-s2.0-84897476394&doi=10.4238%2f2014.February.19.9&partnerID=40&md5=64f739f6ca3ae47459194ece9449e4a2
id 2-s2.0-84897476394
spelling 2-s2.0-84897476394
Hoh B.P.; Sam S.S.; Umi S.H.; Mahiran M.; Nik Khairudin N.Y.; Rafidah Hanim S.; AbuBakar S.
A novel rare copy number variant of the ABCF1 gene identified among dengue fever patients from Peninsular Malaysia
2014
Genetics and Molecular Research
13
1
10.4238/2014.February.19.9
https://www.scopus.com/inward/record.uri?eid=2-s2.0-84897476394&doi=10.4238%2f2014.February.19.9&partnerID=40&md5=64f739f6ca3ae47459194ece9449e4a2
Copy number variation (CNV) is a form of genetic variation in addition to single nucleotide polymorphisms. The significance of CNV in the manifestation of a number of diseases is only recently receiving considerable attention. We genotyped 163 dengue patients from Peninsular Malaysia for genes possibly linked to dengue infection using quantitative real-time PCR. Here, we report a serendipitous discovery of a novel rare CNV of the ABCF1 gene among the dengue patients. Among these patients, two had a gain of 1 copy (CN = 3) and one had lost 1 copy (CN = 1), indicating that a rare CNV of the ABCF1 gene was detected among dengue patients from Peninsular Malaysia. Although the gene is suspected to regulate inflammatory responses and pathogen-induced cytokine storm, its relevance to dengue requires further investigation. © FUNPEC-RP.
Fundacao de Pesquisas Cientificas de Ribeirao Preto
16765680
English
Article
All Open Access; Bronze Open Access
author Hoh B.P.; Sam S.S.; Umi S.H.; Mahiran M.; Nik Khairudin N.Y.; Rafidah Hanim S.; AbuBakar S.
spellingShingle Hoh B.P.; Sam S.S.; Umi S.H.; Mahiran M.; Nik Khairudin N.Y.; Rafidah Hanim S.; AbuBakar S.
A novel rare copy number variant of the ABCF1 gene identified among dengue fever patients from Peninsular Malaysia
author_facet Hoh B.P.; Sam S.S.; Umi S.H.; Mahiran M.; Nik Khairudin N.Y.; Rafidah Hanim S.; AbuBakar S.
author_sort Hoh B.P.; Sam S.S.; Umi S.H.; Mahiran M.; Nik Khairudin N.Y.; Rafidah Hanim S.; AbuBakar S.
title A novel rare copy number variant of the ABCF1 gene identified among dengue fever patients from Peninsular Malaysia
title_short A novel rare copy number variant of the ABCF1 gene identified among dengue fever patients from Peninsular Malaysia
title_full A novel rare copy number variant of the ABCF1 gene identified among dengue fever patients from Peninsular Malaysia
title_fullStr A novel rare copy number variant of the ABCF1 gene identified among dengue fever patients from Peninsular Malaysia
title_full_unstemmed A novel rare copy number variant of the ABCF1 gene identified among dengue fever patients from Peninsular Malaysia
title_sort A novel rare copy number variant of the ABCF1 gene identified among dengue fever patients from Peninsular Malaysia
publishDate 2014
container_title Genetics and Molecular Research
container_volume 13
container_issue 1
doi_str_mv 10.4238/2014.February.19.9
url https://www.scopus.com/inward/record.uri?eid=2-s2.0-84897476394&doi=10.4238%2f2014.February.19.9&partnerID=40&md5=64f739f6ca3ae47459194ece9449e4a2
description Copy number variation (CNV) is a form of genetic variation in addition to single nucleotide polymorphisms. The significance of CNV in the manifestation of a number of diseases is only recently receiving considerable attention. We genotyped 163 dengue patients from Peninsular Malaysia for genes possibly linked to dengue infection using quantitative real-time PCR. Here, we report a serendipitous discovery of a novel rare CNV of the ABCF1 gene among the dengue patients. Among these patients, two had a gain of 1 copy (CN = 3) and one had lost 1 copy (CN = 1), indicating that a rare CNV of the ABCF1 gene was detected among dengue patients from Peninsular Malaysia. Although the gene is suspected to regulate inflammatory responses and pathogen-induced cytokine storm, its relevance to dengue requires further investigation. © FUNPEC-RP.
publisher Fundacao de Pesquisas Cientificas de Ribeirao Preto
issn 16765680
language English
format Article
accesstype All Open Access; Bronze Open Access
record_format scopus
collection Scopus
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