An improved rapid genotyping method for the study of beta-2 adrenergic receptor gene polymorphisms using single tube allele specific multiplex PCR

• Published in: Journal of Clinical Pharmacy and Therapeutics
• Main Author: Zilfalil B.A.; Hoh B.P.; Nizam M.Z.; Liza-Sharmini A.T.; Teh L.K.; Ismail R.
• Format: Article
• Language: English
• Published: 2006
• Online Access: https://www.scopus.com/inward/record.uri?eid=2-s2.0-33751368662&doi=10.1111%2fj.1365-2710.2006.00771.x&partnerID=40&md5=6323a52d2fb989fbfa41dd857b39ddc7

Background: Seventeen single nucleotide polymorphisms (SNPs) have been identified so far, within the beta-2 receptor (β2 AR) gene. The presence of so many SNPs within the β2 AR gene causes a problem, for those studying β2 AR pharmacogenetics, in relation to which SNPs to choose. Most of the work has focused on the three common SNPs within the coding block (alleles 16, 27 and 164) and the techniques developed have been for these three functionally important alleles. Objective: We report an improved polymerase chain reaction (PCR)-based method for the simultaneous detection of five functionally important β2 AR alleles, namely beta 16A/G, beta utr-20C/T, beta 27C/G, beta utr-47C/T and beta 164C/T. Methods: Genomic DNA was used as a template for duplex and triplex PCR to detect the polymorphic sites of the five alleles. Result: DNA sequencing analysis confirmed the specificity of this PCR method. Conclusion: This simplified single-tube multiplexed PCR assay provides an easier, faster and more cost-effective method than those available for studying the specified polymorphisms of the β2AR gene. © 2006 The Authors.